RNAcompete results for RNCMPT00253 / Tb_0253 (Species:Trypanosoma_brucei)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

AGAAAUA 12.5727227342826 AGAAAAA 11.3111346774572 AGAAAUA 12.0703440707434
AGAAAAA 10.5721561872026 AGAAAUA 10.9209379710469 AGAAAAA 11.2574269944924
GAAAAAA 9.71380499977303 AGAAAGA 10.2616400878019 AGAAAGA 10.2360696422795
AGAAAGA 9.53807955982681 AAAAAGA 9.15832526277963 GAAAAAA 9.64548886038773
AGAAACA 9.49076886445668 GAAAAAA 9.09777749799182 AGAAACA 9.55516474080427
AAAAAUG 8.93655786154938 AGAAACA 9.09777749799182 AAAAAGA 9.30503640965011
AAAAAGA 8.87572982464492 AAAAACA 9.09104996857096 AAAAACA 8.84646780253413
AAAAAAU 8.53103761551965 AAACAAA 8.60666785026852 AAAAAUG 8.64497553577105
AAAGAAA 8.34855350480627 AAAAAAC 8.22319867327908 AAAGAAA 8.29062706663597
GAAAAAC 8.24041477253167 AAAACAA 8.10883067312434 AAAAAAG 8.07523878147544

Aligned top 7-mers

Set A

Set B

All data

AGAAAUA-- AGAAAAA- AGAAAUA--
AGAAAAA-- AGAAAUA- AGAAAAA--
-GAAAAAA- AGAAAGA- AGAAAGA--
AGAAAGA-- AAAAAGA- -GAAAAAA-
AGAAACA-- -GAAAAAA AGAAACA--
--AAAAAUG AGAAACA- AAAAAGA--
AAAAAGA-- AAAAACA- AAAAACA--
AAAAAAU-- AAACAAA- --AAAAAUG
AAAGAAA-- AAAAAAC- AAAGAAA--
-GAAAAAC- AAAACAA- AAAAAAG--

generated on Mon Apr 1 14:16:30 EDT 2013