RNAcompete results for RNCMPT00239 / PCBP1 (Species:Mm)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

CCUUUCC 8.87388648546087 CCUUUCC 8.57210169804746 CCUUUCC 8.92455973044706
AUUUCCC 6.62137768920916 AACCCUU 6.95764172387283 AUUUCCC 6.75991972634774
UUUCCCU 6.57687523578777 AUUUCCC 6.689695635722 AACCCUU 6.39102609220862
CUUUCCU 6.13527396722171 AUUCCCU 6.00795938612305 UUUCCCU 6.07433438742882
CCUUACC 6.11473437333491 AAACCCU 5.89942426180879 CCUUACC 5.85160615549577
CCAAUCC 5.98807354436635 CUUUCCC 5.85533186755612 CUUUCCC 5.81680486925623
ACCCUUU 5.72790535513363 UUUCCCU 5.50937615880441 AAACCCU 5.72632152503342
UUUCCCA 5.70736576124684 CUUUUCC 5.47885065509103 CUUUCCU 5.59407663732318
UUUUCCC 5.56358860403928 CAACCCU 5.44493342874282 CCAAUCC 5.51751380759619
CUUUCCC 5.53277921320909 CCAACCC 5.39066586658569 UUUCCCA 5.48619264998061

Aligned top 7-mers

Set A

Set B

All data

--CCUUUCC-- CCUUUCC--- ---CCUUUCC--
---AUUUCCC- ---AACCCUU ----AUUUCCC-
----UUUCCCU -AUUUCCC-- -AACCCUU----
---CUUUCCU- --AUUCCCU- -----UUUCCCU
---CCUUACC- --AAACCCU- ---CCUUACC--
--CCAAUCC-- -CUUUCCC-- ----CUUUCCC-
ACCCUUU---- --UUUCCCU- AAACCCU-----
----UUUCCCA -CUUUUCC-- ----CUUUCCU-
---UUUUCCC- --CAACCCU- ---CCAAUCC--
---CUUUCCC- -CCAACCC-- -----UUUCCCA

generated on Mon Apr 1 14:15:42 EDT 2013