RNAcompete results for RNCMPT00235 / PFF0320c (Species:Plasmodium_falciparum)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

CUAAACU 12.2263893552524 ACUAAAC 9.39121541739175 CUAAACU 10.8015404396949
ACUAAAC 11.4126690255148 CUAAACU 9.03427560987083 ACUAAAC 10.7122887721124
ACUAAUC 7.90002536608812 GCUAAAC 8.60594784084573 GCUAAAC 7.89823619421611
AACUAAC 7.73829213284833 AAACUAA 7.91756392634111 ACUACUA 7.76173364379577
AACUAAA 7.62710053499598 ACUAGAC 7.73399488247321 AACUAGG 7.56748001435144
ACUACUA 7.49063811944991 AACUAGG 7.60651637978717 ACUAAUC 7.50447883723436
CUAACUA 7.27836325082268 ACUACUA 7.47903787710113 ACUAGAC 7.49397864104818
AACUAGG 7.16717165297033 CUAAUCU 7.28527055301835 AAACUAA 7.38897667918638
ACUAACC 7.12673834466039 UACUACU 7.22408087172905 ACUAACU 7.27872461923148
UAACUAA 7.05092589157923 UAACUAG 7.17308947065463 CUAAUCU 7.25772422685912

Aligned top 7-mers

Set A

Set B

All data

----CUAAACU --ACUAAAC- ---CUAAACU
---ACUAAAC- ---CUAAACU --ACUAAAC-
---ACUAAUC- --GCUAAAC- --GCUAAAC-
--AACUAAC-- AAACUAA--- --ACUACUA-
--AACUAAA-- --ACUAGAC- -AACUAGG--
---ACUACUA- -AACUAGG-- --ACUAAUC-
CUAACUA---- --ACUACUA- --ACUAGAC-
--AACUAGG-- ---CUAAUCU AAACUAA---
---ACUAACC- -UACUACU-- --ACUAACU-
-UAACUAA--- UAACUAG--- ---CUAAUCU

generated on Mon Apr 1 14:15:46 EDT 2013