RNAcompete results for RNCMPT00230 / Tb_0230 (Species:Trypanosoma_brucei)
Motif
7-mer scatter plot
Top 7-mers by Z-score
Set A |
score |
Set B |
score |
All data |
score |
GAAGGAC |
10.6125596994204 |
GAAGGAC |
10.5087791033512 |
GAAGGAC |
10.6730900645175 |
UAGAAGG |
7.92512454465618 |
AGAAGGA |
7.13119686873658 |
AGAAGGA |
7.27331203454362 |
AGAAGGA |
7.2627582663234 |
GAAGGGC |
6.29416216800393 |
UAGAAGG |
6.74502572412161 |
GAAGGGC |
6.01396579252402 |
UAGAAGG |
5.52863294421829 |
GAAGGGC |
6.23378090758419 |
AAGAAGG |
5.47394742547564 |
GAGAAGG |
5.4445088536924 |
GAGAAGG |
5.30501949087453 |
GAAGGAA |
5.44019627753511 |
GAAGGAG |
5.35197235411391 |
GAAGGAA |
5.27519687657651 |
GGAAGGA |
5.25034607036967 |
GAAGGUC |
5.25102344548284 |
AAGAAGG |
5.24537426227849 |
UGAAGGA |
5.22503270941427 |
CGAAGGA |
5.1290435142203 |
GAAGGAG |
5.21129127450933 |
GUAGAAG |
5.12799815908527 |
GGAAGGA |
5.02809460558922 |
GGAAGGA |
5.20277052756704 |
GAAGGCC |
5.07315254368192 |
GAGCGGA |
4.9692077422211 |
GAAGGUC |
5.1047819377307 |
Aligned top 7-mers
Set A |
Set B |
All data |
---GAAGGAC |
--GAAGGAC |
--GAAGGAC |
-UAGAAGG-- |
-AGAAGGA- |
-AGAAGGA- |
--AGAAGGA- |
--GAAGGGC |
UAGAAGG-- |
---GAAGGGC |
UAGAAGG-- |
--GAAGGGC |
-AAGAAGG-- |
GAGAAGG-- |
GAGAAGG-- |
---GAAGGAA |
--GAAGGAG |
--GAAGGAA |
--GGAAGGA- |
--GAAGGUC |
AAGAAGG-- |
--UGAAGGA- |
-CGAAGGA- |
--GAAGGAG |
GUAGAAG--- |
-GGAAGGA- |
-GGAAGGA- |
---GAAGGCC |
--GAGCGGA |
--GAAGGUC |
generated on Mon Apr 1 14:16:27 EDT 2013