RNAcompete results for RNCMPT00217 / Tb_0217 (Species:Trypanosoma_brucei)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

ACUGUUG 7.2750648229042 CUGUUGU 6.89375420188045 UGUUUGU 6.66792738542467
UGUUUGU 6.85228071942063 UCUUGUU 6.42353079740772 ACUGUUG 6.39231524951544
UGUUGCU 6.64945861572243 UGUUUGU 6.19864134309467 CUUGUUU 6.23820953911457
CUUGUGU 6.44949316137209 CUUGUUU 6.18695877403945 UCUUGUU 6.13152097037552
CUUGUUU 5.94957952549625 ACUGUUU 5.862767482757 ACUGUUU 5.99816025945169
AUCUUGU 5.84959679832108 CUUUGCU 5.63787802844396 CUGUUGU 5.92110740425126
ACUGUUU 5.84388349962536 ACUGUUG 5.4071472896033 UGUUGCU 5.83812740634311
AUGUUGU 5.76104066853736 ACUUUGU 5.37502022470144 CUUGUGU 5.80256455009675
UUGUUUG 5.74675742179805 AUUGUUG 5.32244866395293 AACUGUU 5.39359170326369
UCUUGUU 5.65534464266647 UGUUGUU 5.3078454526339 CUUUGCU 5.14761528089309

Aligned top 7-mers

Set A

Set B

All data

--ACUGUUG-- -CUGUUGU-- --UGUUUGU-
----UGUUUGU --UCUUGUU- -ACUGUUG--
----UGUUGCU --UGUUUGU- --CUUGUUU-
--CUUGUGU-- ---CUUGUUU ---UCUUGUU
--CUUGUUU-- ---ACUGUUU -ACUGUUU--
AUCUUGU---- --CUUUGCU- --CUGUUGU-
--ACUGUUU-- ACUGUUG--- ---UGUUGCU
---AUGUUGU- -ACUUUGU-- --CUUGUGU-
---UUGUUUG- ---AUUGUUG AACUGUU---
-UCUUGUU--- --UGUUGUU- --CUUUGCU-

generated on Mon Apr 1 14:16:28 EDT 2013