RNAcompete results for RNCMPT00216 / Tb_0216 (Species:Trypanosoma_brucei)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

ACAUUGU 23.6080686455394 ACAUUGU 20.5880416259934 ACAUUGU 22.4444379693468
CAUUGUA 21.3667163005502 CAUAGUA 20.4472345641144 CAUUGUA 21.1348427511639
ACAUAGU 19.0886706020277 CAUUGUA 20.2501046774839 ACAUAGU 19.8031579750839
CAUAGUU 18.7064481693897 ACAUAGU 19.715037842344 CAUAGUA 19.055268657712
CAUUGUU 18.3089368394462 CAUAGUG 18.4196128730577 CAUUGUU 18.0833281102413
UCAUUGU 18.2967057216018 CAUUGUU 17.2900273322067 UCAUUGU 17.9571020651152
CAUUGUG 17.7034965061477 UCAUUGU 17.0835103081176 CAUAGUU 17.5658013252244
CAUAGUA 17.1530962031489 CAUUGUG 16.6767343515784 CAUUGUG 17.5626456740963
CAUUUUU 15.508010853075 GCAUAGU 16.0916027833259 CAUAGUG 17.0703640981046
GCAUAGU 15.1441350972037 CAUAGUU 15.950795721447 GCAUAGU 15.8775279716633

Aligned top 7-mers

Set A

Set B

All data

ACAUUGU- ACAUUGU- ACAUUGU-
-CAUUGUA -CAUAGUA -CAUUGUA
ACAUAGU- -CAUUGUA ACAUAGU-
-CAUAGUU ACAUAGU- -CAUAGUA
-CAUUGUU -CAUAGUG -CAUUGUU
UCAUUGU- -CAUUGUU UCAUUGU-
-CAUUGUG UCAUUGU- -CAUAGUU
-CAUAGUA -CAUUGUG -CAUUGUG
-CAUUUUU GCAUAGU- -CAUAGUG
GCAUAGU- -CAUAGUU GCAUAGU-

generated on Mon Apr 1 14:16:28 EDT 2013