RNAcompete results for RNCMPT00209 / NCU08034 (Species:Neurospora_crassa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

AUUGCAC 15.0679151638122 UAGCACA 12.1871027023815 AUUGCAC 13.2014160355859
AGCACAG 12.4459223439622 UUGCACA 12.0692906995139 UUGCACA 12.1089569017038
UUGCACA 11.8509962512606 AGCACAC 11.6509378730048 UAGCACA 11.3498316238169
AAGCACA 10.8050777979627 AUUGCAC 11.4177181938588 AGCACGA 10.9313394834434
AGCACGA 10.6755374390681 AGCACAU 11.2710542719217 AAGCACA 10.7366919762929
AGCACAA 10.4500412587699 AGCACGA 10.898383650606 AGCACAA 10.7293926947748
GCACAGC 10.2965119445243 AGCACAA 10.7589327084363 AGCACAG 10.6393682227177
UAGCACA 10.1285892570682 AGCACGG 10.4199226593685 AGCACAC 10.6199034720026
UUGCACG 10.1141958838577 AUAGCAC 10.4151140061903 AGCACAU 10.1308516102871
UAGCACG 10.0566223910156 AAGCACA 10.3598144946402 AUGCACA 10.1016544842145

Aligned top 7-mers

Set A

Set B

All data

AUUGCAC--- -UAGCACA- AUUGCAC--
--AGCACAG- -UUGCACA- -UUGCACA-
-UUGCACA-- --AGCACAC -UAGCACA-
-AAGCACA-- AUUGCAC-- --AGCACGA
--AGCACGA- --AGCACAU -AAGCACA-
--AGCACAA- --AGCACGA --AGCACAA
---GCACAGC --AGCACAA --AGCACAG
-UAGCACA-- --AGCACGG --AGCACAC
-UUGCACG-- AUAGCAC-- --AGCACAU
-UAGCACG-- -AAGCACA- -AUGCACA-

generated on Mon Apr 1 14:15:37 EDT 2013