RNAcompete results for RNCMPT00199 / PF10_0068 (Species:Plasmodium_falciparum)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

GGAGGAA 10.5268043859461 GGAGGAA 10.2686300272568 GGAGGAA 10.498735649711
UGGAGGA 9.71207996925858 UGGAGGA 10.1252755852158 UGGAGGA 10.0253643946642
GGUGGAA 9.29226564100911 GGUGGAA 8.64155711009111 GGUGGAA 9.05694075838515
GGAGGAG 9.01476125453911 AGGUGGA 8.45161247438674 GGAGGAG 8.6341587977708
AGGUGGA 8.26407631165234 GGAGGAG 8.0573877587739 AGGUGGA 8.45348274622621
GGGAAGG 7.91185920574811 AUGGAGG 8.0573877587739 GGGAAGG 7.84279769200549
GGGAGGA 7.80868449795799 GUGGAGG 7.89611401147773 GUGGAGG 7.82473008685103
GUGGAGG 7.62723932218914 AGGAGGA 7.83518837361029 AGGAGGA 7.73077854004784
GGUGGAG 7.58810408819979 GGUGGAG 7.63449215475285 GGGAGGA 7.72355149798606
AGGAGGA 7.44223639787581 GGGAAGG 7.5448956284772 GGUGGAG 7.69825685076982

Aligned top 7-mers

Set A

Set B

All data

--GGAGGAA-- --GGAGGAA --GGAGGAA--
-UGGAGGA--- -UGGAGGA- -UGGAGGA---
--GGUGGAA-- --GGUGGAA --GGUGGAA--
--GGAGGAG-- -AGGUGGA- --GGAGGAG--
-AGGUGGA--- --GGAGGAG -AGGUGGA---
----GGGAAGG AUGGAGG-- ----GGGAAGG
-GGGAGGA--- GUGGAGG-- GUGGAGG----
GUGGAGG---- -AGGAGGA- -AGGAGGA---
--GGUGGAG-- --GGUGGAG -GGGAGGA---
-AGGAGGA--- -GGGAAGG- --GGUGGAG--

generated on Mon Apr 1 14:15:44 EDT 2013