RNAcompete results for RNCMPT00161 / FXR1 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

AUGACAA 7.27770287919975 AUGACAA 6.66760471588672 AUGACAA 7.20232063050133
AUGACGA 7.04895861872705 AAUGACA 5.95459609677382 AAUGACA 6.52042373638947
ACGACGA 6.82021435825436 UGGAAAA 5.73560059233199 ACGACGA 6.31895419949278
AAUGACA 6.745623838535 AACGACG 5.56244135626172 AUGACGA 6.2053047171408
UGACAAG 6.19365399261175 AAUGGAA 5.53188384401402 AAUGGAA 5.84369272783906
UGACGAC 5.8903192124197 AAUGACG 5.50132633176632 ACGACAA 5.74037501660999
AAUGGAA 5.86048300453196 ACGACGA 5.40965379502323 UGACAAG 5.67838438987255
ACGACAA 5.83064679664422 ACGACAA 5.38928212019144 AACGACA 5.62672553425801
AACGACA 5.61682064011539 AACGACA 5.26705207120065 AACGACG 5.5285737085904
UGACAGA 5.42288528884506 UGGAAUG 5.20593704670526 AAUGACG 5.42009011179987

Aligned top 7-mers

Set A

Set B

All data

-AUGACAA- ----AUGACAA -AUGACAA-
-AUGACGA- ---AAUGACA- AAUGACA--
-ACGACGA- ----UGGAAAA -ACGACGA-
AAUGACA-- ---AACGACG- -AUGACGA-
--UGACAAG ---AAUGGAA- AAUGGAA--
--UGACGAC ---AAUGACG- -ACGACAA-
AAUGGAA-- ----ACGACGA --UGACAAG
-ACGACAA- ----ACGACAA AACGACA--
AACGACA-- ---AACGACA- AACGACG--
--UGACAGA UGGAAUG---- AAUGACG--

generated on Mon Apr 1 14:15:06 EDT 2013