RNAcompete results for RNCMPT00160 / HNRNPH2 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

GGGAGGG 33.3583035693687 GGGAGGG 31.3940655932798 GGGAGGG 32.61872253844
GGAGGGA 23.6889777894268 GGAGGGA 25.0059098720874 GGAGGGA 24.5075030984823
GGGAUGG 17.7935951451807 GGGAUGG 18.5981184263421 GGGAUGG 18.2562656105725
GGAUGGG 16.3920712855471 UGGGAGG 16.0952180700061 GGAUGGG 15.9996113306628
UGGGAGG 15.0645204100223 GGAUGGG 15.4616386911009 UGGGAGG 15.7369319964934
AGGGAGG 14.6788041357404 AGGGAGG 14.300512845876 AGGGAGG 14.5641616358583
GGGGAGG 12.606239634548 GAGGGAU 12.8474692289654 GAGGGAU 12.3366939486341
GAGGGAU 11.690823956201 CCCCCCC 11.6719438524017 GGGGAGG 11.4863027708433
GGGGGGA 11.2298137516655 GGGGGGA 10.7451376535074 GGGGGGA 11.0737104833348
CCCCCCC 9.97887775253917 GGGGAGG 10.2581716845969 CCCCCCC 10.9596174392007

Aligned top 7-mers

Set A

Set B

All data

-GGGAGGG-- -GGGAGGG-- -GGGAGGG--
--GGAGGGA- --GGAGGGA- --GGAGGGA-
-GGGAUGG-- -GGGAUGG-- -GGGAUGG--
-GGAUGGG-- UGGGAGG--- -GGAUGGG--
UGGGAGG--- -GGAUGGG-- UGGGAGG---
AGGGAGG--- AGGGAGG--- AGGGAGG---
GGGGAGG--- ---GAGGGAU ---GAGGGAU
---GAGGGAU -CCCCCCC-- GGGGAGG---
-GGGGGGA-- -GGGGGGA-- -GGGGGGA--
-CCCCCCC-- GGGGAGG--- -CCCCCCC--

generated on Mon Apr 1 14:15:11 EDT 2013