RNAcompete results for RNCMPT00110 / SRSF1 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

AGGAGCA 10.7715998866962 AAGGACA 10.3821134388767 AGGAGCA 10.7061721191053
AGGACAA 10.1971424718294 AACAGGA 10.3157618304002 AGGACAA 10.3397381697339
GGACACA 10.1463055324607 ACAAGGA 9.91254820965834 AAGGACA 10.0104786789943
AUGGACA 9.62776875089945 AGGAGCA 9.85640454094744 GGACACA 9.45286179951595
AGGACAU 9.50576009641446 AGGACAA 9.65734971551792 AACAGGA 9.10235976098672
GGACAGA 9.27191017531823 AGGACAC 9.45829489008839 AGGACAC 9.05987466540742
AAGGACA 9.04314394815887 GGAUACA 9.11632890794023 AGGACAG 9.05456402846001
GGAGCAA 9.02789286634824 ACAGGAC 8.83561056438578 ACAAGGA 9.0492533915126
GGAGGAC 8.84487988462076 ACAGGAU 8.82540262462016 CAGGACA 8.86869173530057
AGGACAG 8.83471249674701 AGGAACA 8.60082794977659 ACAGGAU 8.80496409193162

Aligned top 7-mers

Set A

Set B

All data

--AGGAGCA- --AAGGACA-- ---AGGAGCA-
--AGGACAA- AACAGGA---- ---AGGACAA-
---GGACACA ACAAGGA---- --AAGGACA--
-AUGGACA-- --AGGAGCA-- ----GGACACA
--AGGACAU- ---AGGACAA- AACAGGA----
---GGACAGA ---AGGACAC- ---AGGACAC-
-AAGGACA-- ----GGAUACA ---AGGACAG-
--GGAGCAA- -ACAGGAC--- ACAAGGA----
GGAGGAC--- -ACAGGAU--- --CAGGACA--
--AGGACAG- --AGGAACA-- -ACAGGAU---

generated on Mon Apr 1 14:16:11 EDT 2013