RNAcompete results for RNCMPT00059 / REF2 (Species:Dm)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

UAGAAGG 6.31636595890084 GAAGGCC 7.24342751511321 GAAGGCC 6.56261287727254
GAAACCC 6.28996343813922 AAGAAGG 6.50077302377253 GAAGACC 6.14345227804831
GAAGACC 6.18058156641252 GAAGGAC 6.36436709679159 GAAGGAC 6.07359217817761
GAAGGCC 5.56578001153483 GAAGACC 5.75811853243186 AAGAAGG 5.85624964524653
GAAGGAC 5.38850594356397 AGAAGGA 5.56866585606944 AGAAGGA 5.62726376233701
AGAAGGA 5.3809623662035 AGAAGGC 5.53456437432421 GAAACCC 5.60397706238011
GAAAACC 5.18482935483148 UGAAGGC 5.52319721374246 UAGAAGG 5.44485127934128
GAAACUC 5.14711146802917 GAAGAAG 5.50804099963347 AGAAGGC 5.42156457938438
GAAGAAG 5.05658853970362 GAAGGGC 5.46636141083374 GAAGAAG 5.4176834627249
GAAGGCA 5.02641423026177 AGAAGAC 5.4322599290885 AGAAGAC 5.35558559617316

Aligned top 7-mers

Set A

Set B

All data

UAGAAGG-- ---GAAGGCC ---GAAGGCC
--GAAACCC -AAGAAGG-- ---GAAGACC
--GAAGACC ---GAAGGAC ---GAAGGAC
--GAAGGCC ---GAAGACC -AAGAAGG--
--GAAGGAC --AGAAGGA- --AGAAGGA-
-AGAAGGA- --AGAAGGC- ---GAAACCC
--GAAAACC --UGAAGGC- -UAGAAGG--
--GAAACUC GAAGAAG--- --AGAAGGC-
--GAAGAAG ---GAAGGGC GAAGAAG---
--GAAGGCA --AGAAGAC- --AGAAGAC-

generated on Mon Apr 1 14:16:04 EDT 2013