RNAcompete results for RNCMPT00049 / RBM28 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

GUGUAGA 9.32945165199284 GUGUAGA 10.3745625332694 GUGUAGA 10.1237870694589
GAGUAGA 8.98324996715491 AGAGUAG 9.43864047005465 AGAGUAG 9.4153018915351
AGAGUAG 8.82533340915866 GAGUAGA 8.88198094226025 GAGUAGA 9.2021293601244
AGUGUAG 8.36373116270808 GAGUAGU 7.29152514856194 GAGUAGU 7.81650790595485
GAGUAGU 7.98716090902472 GGUGUAG 7.27317373555773 GGUGUAG 7.55944691219488
GGUGUAG 7.46482152488328 GUAGUGU 7.10189388085176 AGUGUAG 7.49674910883879
GUGUAGU 7.24616782919616 AGUAGUG 6.67981138175491 GUAGUGU 6.83842217359987
GUAGAUU 6.77241815520742 AGUGUAG 6.25161174498998 AGUAGUG 6.7192963472233
AGUAGAU 6.74812330013107 GAGUAGG 6.24549460732191 AGUAGAU 6.43088645178529
GUGUAGG 6.60842788344208 AGCGUAG 6.17208895530506 GUGUAGG 6.36191886809359

Aligned top 7-mers

Set A

Set B

All data

-GUGUAGA-- -GUGUAGA-- -GUGUAGA--
-GAGUAGA-- AGAGUAG--- AGAGUAG---
AGAGUAG--- -GAGUAGA-- -GAGUAGA--
AGUGUAG--- -GAGUAGU-- -GAGUAGU--
-GAGUAGU-- GGUGUAG--- GGUGUAG---
GGUGUAG--- ---GUAGUGU AGUGUAG---
-GUGUAGU-- --AGUAGUG- ---GUAGUGU
---GUAGAUU AGUGUAG--- --AGUAGUG-
--AGUAGAU- -GAGUAGG-- --AGUAGAU-
-GUGUAGG-- AGCGUAG--- -GUGUAGG--

generated on Mon Apr 1 14:15:54 EDT 2013