RNAcompete results for RNCMPT00046 / PUM (Species:Dm)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

UGUACAG 56.5503791207436 UGUACAG 69.6938869381918 UGUACAG 64.3404319046608
AUGUACA 42.4930739533436 UGUACAU 35.7703655428043 UGUAUAG 37.8528257119936
UGUAUAG 41.0070159785041 UGUAUAG 33.5684619346447 UGUAAAU 35.1565743008256
UGUAAAU 34.7378229986533 UGUAAAU 31.4269331028379 AUGUACA 34.164629534501
UGUACAU 31.1595998651333 AUGUACA 24.544208598623 UGUACAU 33.0462979832779
GUGUAAA 17.9530355039681 UUGUACA 22.5234293195217 UGUAGAU 17.9181828211849
UGUAGAU 17.1753196596418 GUGUACA 20.9998540809725 GUGUAAA 16.773041951953
UGUAUAU 16.4633262810332 UGUAGAU 17.6685870092731 GUGUACA 15.3674677077788
GUACAUA 15.0393395238161 GUGUAUA 14.4793782348742 UUGUACA 15.244910825453
GUGUAUA 13.973175079951 GUGUAAA 13.8046013226963 UGUAUAU 14.823621542458

Aligned top 7-mers

Set A

Set B

All data

-UGUACAG- -UGUACAG -UGUACAG
AUGUACA-- -UGUACAU -UGUAUAG
-UGUAUAG- -UGUAUAG -UGUAAAU
-UGUAAAU- -UGUAAAU AUGUACA-
-UGUACAU- AUGUACA- -UGUACAU
GUGUAAA-- UUGUACA- -UGUAGAU
-UGUAGAU- GUGUACA- GUGUAAA-
-UGUAUAU- -UGUAGAU GUGUACA-
--GUACAUA GUGUAUA- UUGUACA-
GUGUAUA-- GUGUAAA- -UGUAUAU

generated on Mon Apr 1 14:15:52 EDT 2013