RNAcompete results for RNCMPT00043 / PABPC4 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score
GAAAAAA 13.3679201535045 AAAAAAG 13.5949347058447 AAAAAAG 13.0745867770504
CAAAAAA 12.492878650229 AAAAACA 13.2916394326418 AAAAACA 12.9511306554645
AAAAAAA 12.4800575293019 ACAAAAA 13.0641679777395 GAAAAAA 12.8894025946715
AAAAACA 12.173953267167 AAAAAAC 12.3422620410012 AAAAAAC 12.169783359638
AAAAAAG 11.9992654945351 AAAAAGA 12.2158890105 ACAAAAA 12.0544493513143
AAAAAGC 11.9047097276977 GAAAAAA 12.1337465406742 AAAAAGA 12.0382051247899
AAAAAAU 11.8534252439892 AAAAAUG 11.1148639822579 CAAAAAA 11.9537351468627
AAAAAGA 11.7091876335592 AGAAAAA 11.043779152601 AAAAAAA 11.6922030998189
AAAAAAC 11.7091876335592 AAAAACG 11.0153452207382 AAAAAUG 11.6288506163735
AAAAAUG 11.6354661882283 CAAAAAA 10.9031891561683 AGAAAAA 11.2146228399998

Aligned top 7-mers

Set A

Set B

All data
GAAAAAA-- -AAAAAAG- AAAAAAG
CAAAAAA-- -AAAAACA- AAAAACA
-AAAAAAA- -ACAAAAA- GAAAAAA
-AAAAACA- -AAAAAAC- AAAAAAC
-AAAAAAG- --AAAAAGA ACAAAAA
--AAAAAGC GAAAAAA-- AAAAAGA
-AAAAAAU- -AAAAAUG- CAAAAAA
--AAAAAGA -AGAAAAA- AAAAAAA
-AAAAAAC- -AAAAACG- AAAAAUG
-AAAAAUG- CAAAAAA-- AGAAAAA

generated on Mon Apr 1 14:15:39 EDT 2013