RNAcompete results for RNCMPT00041 / MSI1 (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

UAGUUAG 13.1493749656786 UAGUUAG 12.0497804604771 UAGUUAG 12.7718663101283
UAGAUAG 11.3158550580009 UAGGUAG 9.80988661943277 UAGAUAG 10.7313482470362
UAGGUAG 9.8068681739822 UAGAUAG 9.67198966083271 UAGGUAG 9.96497421038923
UAGUAGG 9.09729596971095 UAGCUAG 9.03095515058376 UAGCUAG 8.81352553463883
AGUAGGA 8.51240311916177 UAGUAGA 8.67689539201602 UAGUAGG 8.4473271033346
AGUAGUA 8.44089584276234 UUAGAUA 7.99486448866976 AGUAGGA 8.36427178901818
GUAGUAG 8.41522656405486 AAGUAGA 7.91473517488864 AGUUAGA 7.97919714991477
UAGCUAG 8.35838744691685 AGUAGGA 7.80479030249129 UAGUAGA 7.88292849013892
AGUUAGA 8.3217170487633 AGUAGAA 7.80479030249129 AGUAGUA 7.88292849013892
AGUAGAU 8.21170585430264 AGUAGAC 7.73211487836423 GUAGUAG 7.70171689526672

Aligned top 7-mers

Set A

Set B

All data

--UAGUUAG- -UAGUUAG-- --UAGUUAG-
--UAGAUAG- -UAGGUAG-- --UAGAUAG-
--UAGGUAG- -UAGAUAG-- --UAGGUAG-
--UAGUAGG- -UAGCUAG-- --UAGCUAG-
---AGUAGGA --UAGUAGA- --UAGUAGG-
AGUAGUA--- UUAGAUA--- ---AGUAGGA
-GUAGUAG-- --AAGUAGA- ---AGUUAGA
--UAGCUAG- ---AGUAGGA --UAGUAGA-
---AGUUAGA ---AGUAGAA AGUAGUA---
AGUAGAU--- ---AGUAGAC -GUAGUAG--

generated on Mon Apr 1 14:15:33 EDT 2013