RNAcompete results for RNCMPT00026 / HNRNPK (Species:Hs)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

All data

score

AGACCAA 5.92481602148379 AGACCAA 6.4838861230328 AGACCAA 6.33907021368802
CCAAUCC 5.80370466572516 ACCAACC 5.827221817448 CCAAUCC 5.92894591923795
CCAUACC 5.57710922591869 CCAAUCC 5.79306009056787 CCAAACC 5.63712670972541
CCAAACC 5.5536683183525 CAAUCCC 5.59188547671819 ACCAACC 5.62529620123166
CAGACCA 5.46771832394315 CCAAACC 5.55013225497581 AUUUCCC 5.42812105966913
CCAGACC 5.16298652558272 ACCCAAC 5.54633650754468 CAAUCCC 5.33742049455036
ACCAACC 5.13563880008884 AUUUCCC 5.52356202295793 GACCAAC 5.12447134166283
ACCCAAA 5.10829107459496 GACCAAU 5.44764707433541 CCAACCC 5.08897981618157
GACCAAC 5.07312971324568 AUCCCAA 5.43625983204203 CCAGACC 5.03771427937532
ACCAAAC 5.0340615339687 AAUCCCA 5.36414063085064 CCAUACC 4.99433574823156

Aligned top 7-mers

Set A

Set B

All data

----AGACCAA AGACCAA------ AGACCAA---
--CCAAUCC-- --ACCAACC---- ---CCAAUCC
--CCAUACC-- ---CCAAUCC--- ---CCAAACC
--CCAAACC-- ----CAAUCCC-- --ACCAACC-
---CAGACCA- ---CCAAACC--- ---AUUUCCC
--CCAGACC-- --ACCCAAC---- ---CAAUCCC
--ACCAACC-- ----AUUUCCC-- -GACCAAC--
ACCCAAA---- -GACCAAU----- ---CCAACCC
-GACCAAC--- ------AUCCCAA ---CCAGACC
-ACCAAAC--- -----AAUCCCA- ---CCAUACC

generated on Mon Apr 1 14:15:12 EDT 2013