RNAcompete results index To be updated...

Gene name

ID

Species

IUPAC

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A1CF RNCMPT00001 Homo_sapiens WUAAUUR
A2BP1 RNCMPT00123 Drosophila_melanogaster UGCAUG
RBFOX1 RNCMPT00168 Homo_sapiens WGCAUGM
An_0265 RNCMPT00265 Aspergillus_nidulans ACCYMA
ANKHD1 RNCMPT00002 Homo_sapiens AGACGWW
ARET RNCMPT00003 Drosophila_melanogaster UKUKUGU
ARET RNCMPT00114 Drosophila_melanogaster UKUKUGU
ARET RNCMPT00270 Drosophila_melanogaster UKUGUGU
ASD-1 RNCMPT00180 Caenorhabditis_elegans WGCAUGH
At_0284 RNCMPT00284 Arabidopsis_thaliana DGWGUGD
B52 RNCMPT00134 Drosophila_melanogaster GGASGRV
BRU-3 RNCMPT00122 Drosophila_melanogaster KUGKUGU
BRUNOL4 RNCMPT00004 Homo_sapiens KGUGUKK
BRUNOL5 RNCMPT00166 Homo_sapiens UGUGUKK
BRUNOL6 RNCMPT00187 Homo_sapiens UGUGDKG
An_0287 RNCMPT00287 Aspergillus_nidulans UACUAMK
CG11360 RNCMPT00129 Drosophila_melanogaster GAGUDW
CG14718 RNCMPT00006 Drosophila_melanogaster CAGAKB
CG17838 RNCMPT00131 Drosophila_melanogaster BAAAUUD
CG2931 RNCMPT00147 Drosophila_melanogaster DACUAAG
CG2950 RNCMPT00007 Drosophila_melanogaster CRACGAV
CG33714 RNCMPT00009 Drosophila_melanogaster BBGCGUG
CG5213 RNCMPT00010 Drosophila_melanogaster URCUUU
CG7804 RNCMPT00146 Drosophila_melanogaster WGKRUGR
CG7903 RNCMPT00144 Drosophila_melanogaster HWUGCGR
CNOT4 RNCMPT00008 Drosophila_melanogaster ASACAHW
CNOT4 RNCMPT00156 Homo_sapiens GACAGA
CPEB2 RNCMPT00012 Homo_sapiens CHUUUUU
CPEB4 RNCMPT00158 Homo_sapiens UUUUUU
CPO RNCMPT00133 Drosophila_melanogaster WGCACA
Pr_0249 RNCMPT00249 Phytophthora_ramorum UUGCACD
DAZAP1 RNCMPT00013 Homo_sapiens UAGKWWR
Ot_0262 RNCMPT00262 Ostreococcus_tauri UUUUUUK
Ot_0263 RNCMPT00263 Ostreococcus_tauri AGAACRD
Pp_0206 RNCMPT00206 Physcomitrella_patens RACCUW
Nv_0278 RNCMPT00278 Nematostella_vectensis AGAYASA
EIF-2ALPHA RNCMPT00273 Drosophila_melanogaster WGCAUG
ELAV RNCMPT00121 Drosophila_melanogaster UUUDKUU
ENOX1 RNCMPT00149 Homo_sapiens HRKACAG
Rbm38 RNCMPT00283 Danio_rerio KWGUGUG
HNRNPR RNCMPT00288 Gallus_gallus MMAAAWY
A1CF RNCMPT00291 Gallus_gallus DUAAUUV
RBM47 RNCMPT00279 Gallus_gallus GAUGAW
Rbm24 RNCMPT00285 Tetraodon_nigroviridis WGUGUG
Hnrnpr RNCMPT00289 Xenopus_tropicalis MAAAAAG
Rbm47 RNCMPT00280 Xenopus_tropicalis GAUGAWH
Rbm42 RNCMPT00282 Xenopus_tropicalis WACUAC
Syncrip RNCMPT00281 Xenopus_tropicalis MAAAWWD
ESRP2 RNCMPT00150 Homo_sapiens UGGGRAD
Ng_0261 RNCMPT00261 Naegleria_gruberi RDUUUUG
Pp_0237 RNCMPT00237 Physcomitrella_patens WUGGAG
ETR-1 RNCMPT00183 Caenorhabditis_elegans KKUDUGU
EXC-7 RNCMPT00014 Caenorhabditis_elegans YUDRGUU
FMR1 RNCMPT00015 Drosophila_melanogaster AHGGACR
FMR1 RNCMPT00016 Homo_sapiens KGACARG
FNE RNCMPT00120 Drosophila_melanogaster UUKDGUU
FOX-1 RNCMPT00017 Caenorhabditis_elegans WGCAUGM
FUS RNCMPT00018 Homo_sapiens CGCGC
SRSF10 RNCMPT00088 Homo_sapiens ARAGRRR
SRSF10 RNCMPT00089 Homo_sapiens AGAGARR
SRSF10 RNCMPT00090 Homo_sapiens AGAGAVV
SRSF10 RNCMPT00019 Homo_sapiens AGAGAVM
FXR1 RNCMPT00161 Homo_sapiens AYGACR
FXR2 RNCMPT00020 Homo_sapiens DGACRRR
G3BP2 RNCMPT00021 Homo_sapiens AGGAUDR
Pp_0229 RNCMPT00229 Physcomitrella_patens UGUUUUD
Pp_0228 RNCMPT00228 Physcomitrella_patens YUUUUUU
HNRNPA1 RNCMPT00022 Homo_sapiens DUAGGGW
HNRNPA1L2 RNCMPT00023 Homo_sapiens DUAGGGW
HNRNPA2B1 RNCMPT00024 Homo_sapiens DUAGGGW
HNRNPAB RNCMPT00245 Tetraodon_nigroviridis WRGWUAG
HNRNPC RNCMPT00025 Homo_sapiens HUUUUUK
HNRNPCL1 RNCMPT00167 Homo_sapiens HUUUUUK
HNRNPH2 RNCMPT00160 Homo_sapiens GGGAGGG
HNRNPK RNCMPT00026 Homo_sapiens CCAWMCC
HNRNPL RNCMPT00091 Homo_sapiens ACACRAV
HNRNPL RNCMPT00027 Homo_sapiens AMAYAMA
HNRPLL RNCMPT00178 Homo_sapiens RCAHACA
HOW RNCMPT00118 Drosophila_melanogaster ACUAACV
HRB27C RNCMPT00093 Drosophila_melanogaster UAGGWUA
HRB27C RNCMPT00028 Drosophila_melanogaster UAGGWWA
HRB87F RNCMPT00029 Drosophila_melanogaster GGUAGGG
HRB98DE RNCMPT00095 Drosophila_melanogaster GGUAGGG
HRB98DE RNCMPT00096 Drosophila_melanogaster RGUAGGG
HRB98DE RNCMPT00094 Drosophila_melanogaster GKUAGGK
Hrp1p RNCMPT00031 Saccharomyces_cerevisiae UAYRUAV
HuR RNCMPT00112 Homo_sapiens UUWGUUU
HuR RNCMPT00117 Homo_sapiens UUURKUU
HuR RNCMPT00274 Homo_sapiens UUUUUUK
HuR RNCMPT00032 Homo_sapiens UUDUUUU
HuR RNCMPT00136 Homo_sapiens UUKRUUU
IGF2BP2 RNCMPT00033 Homo_sapiens VMAHWCA
IGF2BP3 RNCMPT00172 Homo_sapiens AMAHWCA
KHDRBS1 RNCMPT00169 Homo_sapiens AUAAAAV
KHDRBS1 RNCMPT00062 Mus_musculus UAAAAVV
KHDRBS2 RNCMPT00185 Homo_sapiens RAUAAAM
KHDRBS3 RNCMPT00034 Homo_sapiens AUAAAV
LARK RNCMPT00035 Drosophila_melanogaster DCGCGCG
LARK RNCMPT00097 Drosophila_melanogaster DCGCGCG
LARK RNCMPT00124 Drosophila_melanogaster SGCGCG
LIN28A RNCMPT00036 Homo_sapiens HGGAGWA
LIN28A RNCMPT00162 Homo_sapiens YGGAGGR
Lm_0212 RNCMPT00212 Leishmania_major CAUUUU
Lm_0223 RNCMPT00223 Leishmania_major KUWCACG
Lm_0254 RNCMPT00254 Leishmania_major HGAACGM
Lm_0255 RNCMPT00255 Leishmania_major AAAMAAA
MAL13P1.35 RNCMPT00234 Plasmodium_falciparum RWUACAC
MAL8P1.40 RNCMPT00197 Plasmodium_falciparum WUACAUR
MATR3 RNCMPT00037 Homo_sapiens MAUCUUR
MBNL1 RNCMPT00038 Homo_sapiens GCUUGC
MEC-8 RNCMPT00181 Caenorhabditis_elegans DWGCACA
MEX-5 RNCMPT00039 Caenorhabditis_elegans UAAUAW
MOD RNCMPT00140 Drosophila_melanogaster ADUGGAA
MSI1 RNCMPT00041 Homo_sapiens UAGUWRG
MSI1 RNCMPT00176 Homo_sapiens UAGKWRG
MSI RNCMPT00099 Drosophila_melanogaster AGUAGKD
MSI RNCMPT00040 Drosophila_melanogaster WGUAGKD
MSI RNCMPT00100 Drosophila_melanogaster AGUAGGD
MUB RNCMPT00137 Drosophila_melanogaster WACCCKW
Nab2p RNCMPT00042 Saccharomyces_cerevisiae AAAAAAR
NCU02404 RNCMPT00238 Neurospora_crassa GGWGGAD
NCU08034 RNCMPT00209 Neurospora_crassa WGCACA
ORB2 RNCMPT00126 Drosophila_melanogaster KUUUKKK
PABPC1 RNCMPT00155 Homo_sapiens ARAAAAM
PABPC3 RNCMPT00153 Homo_sapiens RAAAACM
PABPC4 RNCMPT00043 Homo_sapiens AAAAAAR
PABPC5 RNCMPT00171 Homo_sapiens AGAAADU
PABP RNCMPT00139 Drosophila_melanogaster GAAAAHV
PABPN1 RNCMPT00157 Homo_sapiens ARAAGA
PAPI RNCMPT00011 Drosophila_melanogaster KGUKUGU
PCBP1 RNCMPT00186 Homo_sapiens CCWWHCC
PCBP1 RNCMPT00239 Mus_musculus CYUUCC
Pcbp2 RNCMPT00246 Danio_rerio WWUCCC
PCBP2 RNCMPT00044 Homo_sapiens CCYYCCH
PCBP3 RNCMPT00215 Mus_musculus UUUYCC
PF10_0068 RNCMPT00199 Plasmodium_falciparum GGWGGA
PF10_0214 RNCMPT00240 Plasmodium_falciparum WUWCCGA
PF13_0315 RNCMPT00200 Plasmodium_falciparum KURCAUD
PFF0320c RNCMPT00235 Plasmodium_falciparum ACUAAWC
PFI1435w RNCMPT00202 Plasmodium_falciparum UKUUUUK
PFI1695c RNCMPT00203 Plasmodium_falciparum CYWKCAC
PPRC1 RNCMPT00045 Homo_sapiens SSGCGCS
SFPQ RNCMPT00177 Homo_sapiens KURRUKK
PTBP1 RNCMPT00269 Homo_sapiens HYUUUYU
PTBP1 RNCMPT00268 Homo_sapiens HYUUUYU
PUF68 RNCMPT00141 Drosophila_melanogaster UAWDRGR
PUM RNCMPT00101 Drosophila_melanogaster UGUAMAK
PUM RNCMPT00102 Drosophila_melanogaster UGUAYAK
PUM RNCMPT00103 Drosophila_melanogaster UGUAMRK
PUM RNCMPT00104 Drosophila_melanogaster UGUAMAK
PUM RNCMPT00105 Drosophila_melanogaster UGUAWDU
PUM RNCMPT00046 Drosophila_melanogaster UGUAHAK
QKI RNCMPT00047 Homo_sapiens ACUAACV
QKR58E-1 RNCMPT00142 Drosophila_melanogaster AUAAUWM
RALY RNCMPT00159 Homo_sapiens UUUUUUB
RBM24 RNCMPT00184 Homo_sapiens WGWGUGD
RBM28 RNCMPT00049 Homo_sapiens GWGUAGD
RBM38 RNCMPT00051 Mus_musculus KKGUGUK
RBM3 RNCMPT00050 Homo_sapiens RADACKA
RBM41 RNCMPT00053 Homo_sapiens WUACWUK
RBM42 RNCMPT00151 Homo_sapiens AACUAMG
Rbm4.3 RNCMPT00248 Danio_rerio ACGRCG
RBM45 RNCMPT00241 Homo_sapiens GACGAMV
RBM46 RNCMPT00054 Homo_sapiens RAUSAWD
RBM4 RNCMPT00113 Homo_sapiens GCGCGSG
RBM4 RNCMPT00052 Homo_sapiens GCGCGSS
RBM5 RNCMPT00154 Homo_sapiens SAAGGRG
RBM5 RNCMPT00055 Homo_sapiens GARGGWR
RBM6 RNCMPT00170 Homo_sapiens HAUCCAR
RBM8A RNCMPT00056 Homo_sapiens RYGCGCB
RBMS1 RNCMPT00152 Homo_sapiens KAUAUAS
RBMS3 RNCMPT00173 Homo_sapiens HAUAUA
RBMS3 RNCMPT00057 Homo_sapiens MUAUAKM
RBP1 RNCMPT00058 Drosophila_melanogaster WCAACRR
RBP1-LIKE RNCMPT00127 Drosophila_melanogaster AUCADCR
RBP9 RNCMPT00132 Drosophila_melanogaster UUDDGUU
REF2 RNCMPT00059 Drosophila_melanogaster AGAAGRM
RIN RNCMPT00138 Drosophila_melanogaster RRWUGAW
RNP4F RNCMPT00060 Drosophila_melanogaster AGAKARR
RO3G_00049 RNCMPT00205 Rhizopus_oryzae RGGGGAA
ROX8 RNCMPT00148 Drosophila_melanogaster MYAUUUU
RSF1 RNCMPT00061 Drosophila_melanogaster ACGACGV
SAMD4A RNCMPT00063 Homo_sapiens GCKGGHM
SART3 RNCMPT00064 Homo_sapiens ARAAAAM
SF1 RNCMPT00065 Drosophila_melanogaster ACUAAYV
SF2 RNCMPT00066 Drosophila_melanogaster DGGAGGA
SRSF1 RNCMPT00106 Homo_sapiens GRAGGA
SRSF1 RNCMPT00109 Homo_sapiens GGASGRV
SRSF1 RNCMPT00107 Homo_sapiens GGAGGA
SRSF1 RNCMPT00108 Homo_sapiens GGASGRV
SRSF1 RNCMPT00110 Homo_sapiens AGGASM
SRSF1 RNCMPT00163 Homo_sapiens GGRGGAV
Sf3b4 RNCMPT00224 Danio_rerio CAAAAG
SHEP RNCMPT00174 Drosophila_melanogaster WAUWUWD
SHEP RNCMPT00175 Drosophila_melanogaster WUAUWWA
SHEP RNCMPT00068 Drosophila_melanogaster AUAUUWD
SM RNCMPT00069 Drosophila_melanogaster ABACACV
Smp_067420 RNCMPT00232 Schistosoma_mansoni DWWUUUU
SNF RNCMPT00145 Drosophila_melanogaster UWGCAC
SNRNP70 RNCMPT00070 Homo_sapiens RWUCAAG
SNRNP70K RNCMPT00143 Drosophila_melanogaster AUCAHG
SNRPA RNCMPT00071 Homo_sapiens WUGCACR
SRP54 RNCMPT00272 Drosophila_melanogaster KKRGG
SRSF2 RNCMPT00072 Homo_sapiens GGAGWD
SRSF7 RNCMPT00073 Homo_sapiens ACGACG
SRSF9 RNCMPT00067 Homo_sapiens KGRWGSM
SRSF9 RNCMPT00074 Homo_sapiens AKGAVMR
STAR-PAP RNCMPT00075 Homo_sapiens MRAUACU
SUP-12 RNCMPT00179 Caenorhabditis_elegans WGUGUGD
SUP-26 RNCMPT00182 Caenorhabditis_elegans AUAUWWR
SXL RNCMPT00119 Drosophila_melanogaster UUUUUUU
TARDBP RNCMPT00076 Homo_sapiens GAAUGD
Tb_0251 RNCMPT00251 Trypanosoma_brucei HUUCACR
Tb_0252 RNCMPT00252 Trypanosoma_brucei WGUAGRW
Tb_0230 RNCMPT00230 Trypanosoma_brucei GAAGGD
Tb_0216 RNCMPT00216 Trypanosoma_brucei CAUWGUD
Tb_0217 RNCMPT00217 Trypanosoma_brucei CUKUUKY
Tb_0218 RNCMPT00218 Trypanosoma_brucei DUUAUH
Tb_0219 RNCMPT00219 Trypanosoma_brucei UAUACU
Tb_0220 RNCMPT00220 Trypanosoma_brucei CUUUCU
Tb_0253 RNCMPT00253 Trypanosoma_brucei ARAAANA
Tp_0225 RNCMPT00225 Thalassiosira_pseudonana HACRCGC
TIA1 RNCMPT00077 Homo_sapiens UUUUUBK
TIA1 RNCMPT00165 Homo_sapiens WUUUUUB
TIAR-1 RNCMPT00256 Caenorhabditis_elegans UUUUUU
TIAR-3 RNCMPT00005 Caenorhabditis_elegans HUUUUUU
TRA2 RNCMPT00078 Drosophila_melanogaster VAAGAA
Tv_0257 RNCMPT00257 Trichomonas_vaginalis ADAAAAR
Tv_0258 RNCMPT00258 Trichomonas_vaginalis UKUUUGD
Tv_0259 RNCMPT00259 Trichomonas_vaginalis AYCAUGD
Tv_0226 RNCMPT00226 Trichomonas_vaginalis CAAUAA
Tv_0236 RNCMPT00236 Trichomonas_vaginalis YUUUUUK
U2AF2 RNCMPT00079 Homo_sapiens UUUUUYC
U2AF50 RNCMPT00080 Drosophila_melanogaster UUUUUYY
UNC-75 RNCMPT00081 Caenorhabditis_elegans UGUUGUD
Vts1p RNCMPT00111 Saccharomyces_cerevisiae GCUGGCS
Vts1p RNCMPT00082 Saccharomyces_cerevisiae GCUGGYS
YBX1 RNCMPT00116 Homo_sapiens AACAUCD
YBX1 RNCMPT00083 Homo_sapiens AACAUC
YBX2 RNCMPT00084 Homo_sapiens AACAWCD
ZC3H10 RNCMPT00085 Homo_sapiens SSAGCGM
ZC3H14 RNCMPT00086 Homo_sapiens UUUDUUU
ZCRB1 RNCMPT00087 Homo_sapiens GRHUUAA
ZNF638 RNCMPT00164 Homo_sapiens BGUUSKU

generated on Tue Apr 2 12:26:08 EDT 2013