RNAcompete results for RNCMPT00862 / PK05280.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

AGAUACA 6.75 AGAUACA 6.68 AGAUACA 6.95
GAUACGA 6.48 GAUACGA 6.05 GAUACGA 6.48
AGAUACG 5.70 UGGAAGG 5.42 AGAUACG 5.53
GAUACAG 5.57 GAUACAA 5.38 GAUACAG 5.45
UGGAAAG 5.35 UGAUGGA 5.33 UGAUGGA 5.13
GAUGGAA 4.97 AAGACGG 5.22 GAAACGA 5.11
GAUAGAA 4.95 GAAACGA 5.18 GAUACAA 4.97
AGAUAGA 4.87 AGAUACG 5.05 UGGAAGG 4.89
GAUAAGA 4.86 UUGGAUA 4.97 AGAAACA 4.77
GGAAAGA 4.83 GAUACAG 4.95 GAUGGAA 4.74

Aligned top 7-mers

Set A

Set B

All data

AGAUACA--- --AGAUACA- AGAUACA---
-GAUACGA-- ---GAUACGA -GAUACGA--
AGAUACG--- --UGGAAGG- AGAUACG---
-GAUACAG-- ---GAUACAA -GAUACAG--
---UGGAAAG --UGAUGGA- UGAUGGA---
-GAUGGAA-- ---AAGACGG -GAAACGA--
-GAUAGAA-- ---GAAACGA -GAUACAA--
AGAUAGA--- --AGAUACG- ---UGGAAGG
-GAUAAGA-- UUGGAUA--- AGAAACA---
GGAAAGA--- ---GAUACAG -GAUGGAA--

generated on Thu Aug 11 08:02:19 EDT 2022