RNAcompete results for RNCMPT00840 / Sfa-1 (Species:Caenorhabditis_briggsae)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GAAUAAU 20.02 AGAUAAU 19.02 AGAUAAU 19.37
AGAUAAU 18.03 GACUAAU 16.03 GAAUAAU 18.20
AUUAAUG 15.73 GAAUAAU 15.33 GACUAAU 16.33
GACUAAU 15.54 ACUAAUG 14.93 AGAAUAA 14.69
AGAAUAA 14.07 AGAAUAA 13.94 AUUAAUG 13.63
GAUUAAU 13.63 GAUAAUA 13.09 GAUUAAU 12.93
AAUAAUG 13.29 AUAAUCA 12.16 ACUAAUA 12.76
ACUAAUA 13.17 AAUAAUU 12.15 ACUAAUG 12.50
AGACUAA 11.95 AGACUAA 11.91 AGACUAA 12.46
UUAAUGA 11.76 ACUAAUA 11.66 GAUAAUA 12.23

Aligned top 7-mers

Set A

Set B

All data

-GAAUAAU-- -AGAUAAU-- -AGAUAAU-
-AGAUAAU-- -GACUAAU-- -GAAUAAU-
--AUUAAUG- -GAAUAAU-- -GACUAAU-
-GACUAAU-- --ACUAAUG- AGAAUAA--
AGAAUAA--- AGAAUAA--- --AUUAAUG
-GAUUAAU-- --GAUAAUA- -GAUUAAU-
--AAUAAUG- ---AUAAUCA --ACUAAUA
--ACUAAUA- --AAUAAUU- --ACUAAUG
AGACUAA--- AGACUAA--- AGACUAA--
---UUAAUGA --ACUAAUA- --GAUAAUA

generated on Thu Aug 11 08:01:35 EDT 2022