RNAcompete results for RNCMPT00830 / PK21151.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

AUUGCAC 18.53 UUGCACA 13.11 AUUGCAC 15.56
AUGCACA 14.09 AUGCACA 13.04 AUGCACA 13.88
UGCACAA 13.09 AAGCACA 12.81 UGCACAA 13.22
UGCACAG 12.39 UGCACAA 12.47 UUGCACA 13.09
UUGCACA 12.26 AUUGCAC 12.14 AAGCACA 12.76
UUGCACG 12.03 AGCACAU 11.57 AGCACAA 11.50
AAGCACA 11.89 AGCACAC 11.39 UUGCACG 11.14
AGCACAA 11.75 UUUGCAC 11.20 UGCACAG 11.11
AGCACAG 10.86 UGCACAU 10.83 CAUUGCA 11.07
CAUUGCA 10.82 CAUUGCA 10.82 UAGCACA 10.84

Aligned top 7-mers

Set A

Set B

All data

-AUUGCAC-- --UUGCACA- -AUUGCAC--
--AUGCACA- --AUGCACA- --AUGCACA-
---UGCACAA --AAGCACA- ---UGCACAA
---UGCACAG ---UGCACAA --UUGCACA-
--UUGCACA- -AUUGCAC-- --AAGCACA-
--UUGCACG- ---AGCACAU ---AGCACAA
--AAGCACA- ---AGCACAC --UUGCACG-
---AGCACAA -UUUGCAC-- ---UGCACAG
---AGCACAG ---UGCACAU CAUUGCA---
CAUUGCA--- CAUUGCA--- --UAGCACA-

generated on Thu Aug 11 08:01:15 EDT 2022