RNAcompete results for RNCMPT00801 / Rsp-1 (Species:Caenorhabditis_elegans)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GGAGGAG 15.40 GGAGGAG 11.21 GGAGGAG 13.64
GGGGAGC 11.11 GGGGAGC 9.72 GGGGAGC 10.67
GAGGAGC 10.98 CGGGGGC 9.49 CGGAGGA 10.09
CGGAGGA 10.61 CGGAGGA 9.42 GAGGAGC 9.42
CGGAGGG 8.93 GGAGGGU 8.10 CGGGGGC 8.26
UGGAGGA 8.31 GGGGGCC 7.74 GAGGGGG 8.14
GAGGGGG 8.21 GAGGAGC 7.72 CGGAGGG 7.85
GGAGGGG 7.92 GAGGGGG 7.43 UGGAGGA 7.52
GGCUGGG 6.91 GGGCAGG 7.41 GGAGGGG 7.45
ACGGGGG 6.76 GAGGGUG 7.26 GGGGGCC 7.14

Aligned top 7-mers

Set A

Set B

All data

--GGAGGAG- -GGAGGAG- -GGAGGAG-
---GGGGAGC --GGGGAGC --GGGGAGC
---GAGGAGC CGGGGGC-- CGGAGGA--
-CGGAGGA-- CGGAGGA-- --GAGGAGC
-CGGAGGG-- -GGAGGGU- CGGGGGC--
-UGGAGGA-- -GGGGGCC- --GAGGGGG
---GAGGGGG --GAGGAGC CGGAGGG--
--GGAGGGG- --GAGGGGG UGGAGGA--
--GGCUGGG- --GGGCAGG -GGAGGGG-
ACGGGGG--- -GAGGGUG- -GGGGGCC-

generated on Thu Aug 11 08:00:17 EDT 2022