RNAcompete results for RNCMPT00790 / PK07890.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score
GAUAUUA 21.45 GAUACUA 20.69 GAUACUA 20.49
AGAUAUU 19.59 AGAUACU 18.40 AGAUAUU 19.42
GAUACUA 19.14 AGAUAUU 18.18 GAUAUUA 18.71
AGAUACU 17.66 GAUAUUA 15.01 AGAUACU 18.62
GGAUACU 13.12 GAUAUUG 13.94 GAUAUUG 13.23
GAUACUG 12.65 GAUACGA 13.49 GAUACGA 13.02
AGAUACA 12.18 GAUACUU 12.46 GAUACUG 12.83
AUAUUAG 11.69 GAUACUG 12.16 GGAUACU 12.70
GAUACGA 11.66 GGAUAUU 11.90 GAUACUU 12.07
GGAUAUU 11.65 GGAUACU 11.61 GGAUAUU 12.05

Aligned top 7-mers

Set A

Set B

All data
-GAUAUUA- -GAUACUA -GAUACUA
AGAUAUU-- AGAUACU- AGAUAUU-
-GAUACUA- AGAUAUU- -GAUAUUA
AGAUACU-- -GAUAUUA AGAUACU-
GGAUACU-- -GAUAUUG -GAUAUUG
-GAUACUG- -GAUACGA -GAUACGA
AGAUACA-- -GAUACUU -GAUACUG
--AUAUUAG -GAUACUG GGAUACU-
-GAUACGA- GGAUAUU- -GAUACUU
GGAUAUU-- GGAUACU- GGAUAUU-

generated on Thu Aug 11 07:59:55 EDT 2022