RNAcompete results for RNCMPT00789 / PK00353.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

ACAAGCA 8.39 CCAAGCA 8.04 ACAAGCA 8.08
CAUAGCA 7.43 CAAAGCA 7.86 CAUGCAA 7.67
CAAGCAU 7.19 CAUGCAA 7.82 CAAAGCA 7.50
CAUGCAA 7.15 CAUUGCA 7.44 CAUUGCA 7.40
CAUUGCA 7.03 ACAAGCA 7.41 CAUAGCA 7.24
CAAAGCA 6.87 CAAUGCA 7.38 CAAUGCA 7.24
CAAUGCA 6.65 CAAGCAA 7.24 CAAGCAU 7.23
AGCAAAC 6.32 AGCAUAA 7.14 CAAGCAA 6.88
CAGCAAA 6.26 ACACGCA 7.03 AAGCACA 6.58
CACAGCA 6.25 CAAGCAU 7.01 CACAGCA 6.51

Aligned top 7-mers

Set A

Set B

All data

ACAAGCA--- CCAAGCA--- ACAAGCA--
CAUAGCA--- CAAAGCA--- -CAUGCAA-
-CAAGCAU-- -CAUGCAA-- CAAAGCA--
-CAUGCAA-- CAUUGCA--- CAUUGCA--
CAUUGCA--- ACAAGCA--- CAUAGCA--
CAAAGCA--- CAAUGCA--- CAAUGCA--
CAAUGCA--- -CAAGCAA-- -CAAGCAU-
---AGCAAAC ---AGCAUAA -CAAGCAA-
--CAGCAAA- ACACGCA--- --AAGCACA
CACAGCA--- -CAAGCAU-- CACAGCA--

generated on Thu Aug 11 07:59:53 EDT 2022