RNAcompete results for RNCMPT00757 / RBPMS2 (Species:Monodelphis_domestica)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GAGCACA 10.46 GAGCACA 11.45 GAGCACA 11.16
AGAGCAC 9.78 AGAGCAC 10.39 AGAGCAC 10.33
AUCACGA 9.70 AAUCACG 9.67 AUUCACG 8.92
AUUCACG 9.57 ACACACA 8.23 AUCACAC 8.35
AGAUCAC 8.48 UUUCACG 8.23 AUCACGA 8.26
AUCACAC 8.46 AGCACAC 8.20 AAUCACG 8.14
ACACGGG 8.44 ACACACG 8.06 ACACACG 8.10
ACACAAA 8.42 AAUUCAC 7.86 ACACACA 8.07
ACACGAG 8.05 CACACAG 7.86 ACACGAG 8.03
AACACAA 7.88 AUUCACG 7.84 UUUCACG 8.02

Aligned top 7-mers

Set A

Set B

All data

-GAGCACA-- GAGCACA--- -GAGCACA--
AGAGCAC--- -AGAGCAC-- AGAGCAC---
--AUCACGA- --AAUCACG- -AUUCACG--
-AUUCACG-- --ACACACA- --AUCACAC-
AGAUCAC--- --UUUCACG- --AUCACGA-
--AUCACAC- -AGCACAC-- -AAUCACG--
---ACACGGG --ACACACG- -ACACACG--
---ACACAAA -AAUUCAC-- -ACACACA--
---ACACGAG ---CACACAG ---ACACGAG
--AACACAA- --AUUCACG- -UUUCACG--

generated on Thu Aug 11 07:58:48 EDT 2022