RNAcompete results for RNCMPT00475 / AT2G41060-TAIR-G (Species:Arabidopsis_thaliana)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

UUUUUUG 12.33 CGGAUUU 12.00 CGGAUUU 11.49
GAUUUUU 11.95 UUUUUCG 11.08 GUUUUUU 11.34
GUUUUUU 11.53 GUUUUUU 10.83 UUUUUUG 11.04
CGAUUUU 11.25 UGAUUUU 10.41 GAUUUUU 11.01
UUUUUAG 11.08 GUUUUUG 10.02 UUUUUCG 10.73
UUUUUUU 10.92 GGAUUUU 9.94 GUUUUUG 10.39
UUUUUGA 10.85 UUUUUUC 9.88 UUUUUAG 10.20
CGGAUUU 10.65 GGUUUUU 9.68 GGUUUUU 10.19
UUUUUGG 10.57 GAUUUUU 9.60 UUUUUGG 10.14
CGGUUUU 10.55 GUUUUAG 9.60 UUUUUGA 10.03

Aligned top 7-mers

Set A

Set B

All data

---UUUUUUG- CGGAUUU--- CGGAUUU--
--GAUUUUU-- ---UUUUUCG GUUUUUU--
--GUUUUUU-- -GUUUUUU-- -UUUUUUG-
-CGAUUUU--- -UGAUUUU-- GAUUUUU--
----UUUUUAG --GUUUUUG- -UUUUUCG-
--UUUUUUU-- -GGAUUUU-- -GUUUUUG-
----UUUUUGA --UUUUUUC- -UUUUUAG-
CGGAUUU---- -GGUUUUU-- GGUUUUU--
----UUUUUGG -GAUUUUU-- -UUUUUGG-
-CGGUUUU--- --GUUUUAG- --UUUUUGA

generated on Wed Aug 10 04:03:27 EDT 2022