RNAcompete results for RNCMPT00431 / PK27602.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score
GAGUGAA 14.37 GAGUGAA 16.23 GAGUGAA 15.67
UGAGAGA 13.52 UGAGUGA 15.04 AGAGUGA 13.55
AGAGUGA 12.58 GAGUGAG 14.30 GGAGUGA 13.51
GUGAGAG 12.32 GGAGUGA 14.25 GAGUGAG 13.05
GGAGUGA 12.31 GAGAGUG 14.02 UGAGUGA 12.99
GAGUGUA 12.26 AGAGUGA 13.86 GAGAGUG 12.79
GAGUGAG 11.59 GAGUGUG 12.19 GUGAGAG 12.20
GAGAGAA 11.50 GAGUGGA 11.62 GAGUGUA 11.52
UGAGUGA 11.27 GUGAGAG 11.53 GAGAGAA 11.47
GAGAGUG 10.83 GAGUGAC 11.44 GAGUGUG 11.29

Aligned top 7-mers

Set A

Set B

All data
--GAGUGAA -GAGUGAA --GAGUGAA
-UGAGAGA- UGAGUGA- -AGAGUGA-
-AGAGUGA- -GAGUGAG -GGAGUGA-
--GUGAGAG GGAGUGA- --GAGUGAG
-GGAGUGA- -GAGAGUG -UGAGUGA-
--GAGUGUA AGAGUGA- GAGAGUG--
--GAGUGAG -GAGUGUG --GUGAGAG
--GAGAGAA -GAGUGGA --GAGUGUA
-UGAGUGA- -GUGAGAG --GAGAGAA
GAGAGUG-- -GAGUGAC --GAGUGUG

generated on Wed Aug 10 04:02:02 EDT 2022