RNAcompete results for RNCMPT00392 / PK14112.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GAUACUG 12.13 GAUACUG 13.25 GAUACUG 13.14
AGAUACU 12.09 AGAUACU 11.48 AGAUACU 12.24
CUGUAUU 8.07 CUGUAUG 8.80 CUGUAUG 8.04
UUGCUGA 7.82 GCUGUAU 8.35 GAUACUA 7.56
GAUACUA 7.20 GAUACUU 7.69 GCUGUAU 7.51
UGUAUGA 6.96 GAUACUA 7.36 GAUACUU 7.27
CUGUAUG 6.82 AUACUGU 6.84 CUGUAUU 6.89
UUUUUUG 6.78 UGUAUGG 6.38 UUGCUGA 6.87
ACUGUAU 6.67 CUGUUUG 6.36 GGAUACU 6.31
UGUUUUG 6.67 CUGUUUU 6.33 CUGUUUU 6.25

Aligned top 7-mers

Set A

Set B

All data

----GAUACUG -GAUACUG----- -GAUACUG----
---AGAUACU- AGAUACU------ AGAUACU-----
---CUGUAUU- -----CUGUAUG- -----CUGUAUG
UUGCUGA---- ----GCUGUAU-- -GAUACUA----
----GAUACUA -GAUACUU----- ----GCUGUAU-
----UGUAUGA -GAUACUA----- -GAUACUU----
---CUGUAUG- --AUACUGU---- -----CUGUAUU
----UUUUUUG ------UGUAUGG --UUGCUGA---
--ACUGUAU-- -----CUGUUUG- GGAUACU-----
----UGUUUUG -----CUGUUUU- -----CUGUUUU

generated on Wed Aug 10 04:00:46 EDT 2022