RNAcompete results for RNCMPT00382 / AT3G55460-TAIR-G (Species:Arabidopsis_thaliana)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GAAGACA 8.48 GAAGACA 9.83 GAAGACA 9.28
AGAAGAC 8.40 AGAAGAC 9.07 AGAAGAC 8.93
GAAGACG 8.27 GAAGAAG 8.66 GAAGACG 8.31
AGAAGAA 7.74 GAAGACG 7.98 GAAGAAG 8.21
GAGAAGA 7.69 AAGAAGA 7.85 AGAAGAA 7.87
GAAGAUA 7.47 AGAAGAA 7.64 AGAAGAU 7.54
GAAGAAG 7.44 AGAAGAU 7.41 GAAGAUA 7.49
GAAGAUG 7.40 GAAGAUA 7.17 GAAGAUG 7.30
AGAAGAU 7.33 AAGAAGG 7.15 AAGAAGA 7.25
ACGAAGA 6.52 GAAGACU 7.01 GAGAAGA 7.23

Aligned top 7-mers

Set A

Set B

All data

--GAAGACA --GAAGACA --GAAGACA
-AGAAGAC- -AGAAGAC- -AGAAGAC-
--GAAGACG --GAAGAAG --GAAGACG
-AGAAGAA- --GAAGACG --GAAGAAG
GAGAAGA-- AAGAAGA-- -AGAAGAA-
--GAAGAUA -AGAAGAA- -AGAAGAU-
--GAAGAAG -AGAAGAU- --GAAGAUA
--GAAGAUG --GAAGAUA --GAAGAUG
-AGAAGAU- AAGAAGG-- AAGAAGA--
ACGAAGA-- --GAAGACU GAGAAGA--

generated on Wed Aug 10 04:00:27 EDT 2022