RNAcompete results for RNCMPT00368 / PK15111.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

AGAAGUA 7.06 AAGUAGA 7.97 GAAGAAG 7.30
AGAAGAA 7.05 GAAGAAG 7.93 GAAGUAG 7.21
AGUAGAU 6.80 GAAGUAG 7.57 AGAAGUA 7.10
AGUAGGA 6.76 AGUAGAA 7.42 AGAAGAA 7.09
GAAGUAG 6.52 AGAAGUA 6.82 AAGUAGA 7.02
GAAGAAG 6.35 AGAAGAA 6.77 AGUAGAA 6.76
AGUAGUA 6.22 AGUAGAG 6.69 AGUAGGA 6.49
GAAGAUA 6.01 GUAGAGA 6.58 AGUAGAG 6.21
AAGAAGU 5.72 AAGAAGA 6.57 GUAGAGA 6.15
AGUAGAA 5.69 GAGUAGA 6.11 AAGAAGA 5.95

Aligned top 7-mers

Set A

Set B

All data

AGAAGUA-- --AAGUAGA-- -GAAGAAG---
AGAAGAA-- -GAAGAAG--- -GAAGUAG---
AGUAGAU-- -GAAGUAG--- AGAAGUA----
AGUAGGA-- ---AGUAGAA- ---AGAAGAA-
-GAAGUAG- AGAAGUA---- --AAGUAGA--
-GAAGAAG- ---AGAAGAA- ---AGUAGAA-
AGUAGUA-- ---AGUAGAG- ---AGUAGGA-
-GAAGAUA- ----GUAGAGA ---AGUAGAG-
--AAGAAGU --AAGAAGA-- ----GUAGAGA
AGUAGAA-- --GAGUAGA-- --AAGAAGA--

generated on Wed Aug 10 04:00:00 EDT 2022