RNAcompete results for RNCMPT00366 / PK13173.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GAACGAG 6.23 GAAGAUG 6.29 GAAGAUG 6.24
AGAUGAA 6.07 AGGAGAA 6.28 AGAUGAA 6.16
GAUGAUG 6.05 GAAGAAG 6.22 AGGAGAA 5.88
GAAGAUG 6.00 AGAUGAA 6.02 GAUGAAG 5.77
GAAGAUA 5.74 GAUGAAG 5.86 GAACGAG 5.75
AAGCAGA 5.58 GGACGAG 5.76 GAAGAAG 5.66
GAGAUGA 5.52 AAGCAGA 5.44 AAGCAGA 5.63
AUGGAGA 5.51 GAGAAGA 5.39 GAGAUGA 5.47
GGAGAUA 5.51 GGAGAAG 5.34 GAUGAUG 5.45
GAUGAAG 5.48 AGAAGAU 5.31 AGGAGAU 5.44

Aligned top 7-mers

Set A

Set B

All data

--GAACGAG-- -GAAGAUG-- -GAAGAUG--
----AGAUGAA AGGAGAA--- AGAUGAA---
--GAUGAUG-- -GAAGAAG-- AGGAGAA---
--GAAGAUG-- AGAUGAA--- -GAUGAAG--
--GAAGAUA-- -GAUGAAG-- -GAACGAG--
---AAGCAGA- -GGACGAG-- -GAAGAAG--
---GAGAUGA- --AAGCAGA- --AAGCAGA-
AUGGAGA---- --GAGAAGA- --GAGAUGA-
--GGAGAUA-- -GGAGAAG-- -GAUGAUG--
--GAUGAAG-- ---AGAAGAU ---AGGAGAU

generated on Wed Aug 10 03:59:56 EDT 2022