RNAcompete results for RNCMPT00364 / PK26404.1 (Species:Cannabis_sativa)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

GCGCGCG 7.97 GUGCGCG 7.98 UGCGCGC 8.24
UGCGCGC 7.59 UGCGCGC 7.90 GUGCGCG 8.12
GUGCGCG 7.38 CGCGCGG 7.24 GCGCGCG 7.52
AGCGCGC 6.73 ACGCGCG 6.51 CGCGCGG 6.99
CGCGGCG 6.02 UCGCGCG 6.39 AGCGCGC 6.53
CGCGCGG 5.91 UGCGCGG 6.25 CGCGGCG 6.28
CGCGCUG 5.89 GCGCGCG 6.24 UCGCGCG 6.19
GCGCAGC 5.76 CGCGCAG 6.19 CGCGCAG 6.19
CGCGCGU 5.59 UGAGCGC 6.05 ACGCGCG 6.14
GCGCGAC 5.58 GCGCGCA 5.93 CGCGCUG 5.82

Aligned top 7-mers

Set A

Set B

All data

-GCGCGCG- -GUGCGCG- UGCGCGC--
UGCGCGC-- UGCGCGC-- -GUGCGCG-
-GUGCGCG- --CGCGCGG -GCGCGCG-
AGCGCGC-- -ACGCGCG- --CGCGCGG
--CGCGGCG -UCGCGCG- AGCGCGC--
--CGCGCGG --UGCGCGG --CGCGGCG
--CGCGCUG -GCGCGCG- -UCGCGCG-
-GCGCAGC- --CGCGCAG --CGCGCAG
--CGCGCGU UGAGCGC-- -ACGCGCG-
-GCGCGAC- -GCGCGCA- --CGCGCUG

generated on Wed Aug 10 03:59:52 EDT 2022