RNAcompete results for RNCMPT00329 / AT2G46610-TAIR-G (Species:Arabidopsis_thaliana)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

ACGAGCG 7.28 AGACGAA 7.07 ACGAGCG 7.28
ACGACGA 6.77 ACGAGCG 6.45 ACGACGA 6.81
CGAGCGA 6.48 ACGACGA 6.11 AGACGAA 6.38
ACGAACG 5.58 ACGAUGG 6.06 ACGAUGA 5.74
GACGAAG 5.33 ACGAUGA 5.56 GACGAAG 5.72
GGCGAAC 5.31 CGAGCGG 5.49 CGAGCGA 5.68
ACGAUGA 5.24 GACGAAU 5.48 GACGAUG 5.45
CGACGAA 5.19 GACGAAA 5.44 AGACGAU 5.35
GAUACGA 5.16 GACGAAG 5.36 AGAACGA 5.34
ACGAUAA 5.15 GACGAUG 5.32 GACGAAA 5.30

Aligned top 7-mers

Set A

Set B

All data

---ACGAGCG AGACGAA--- ---ACGAGCG-
ACGACGA--- --ACGAGCG- ---ACGACGA-
-CGAGCGA-- --ACGACGA- -AGACGAA---
---ACGAACG --ACGAUGG- ---ACGAUGA-
--GACGAAG- --ACGAUGA- --GACGAAG--
--GGCGAAC- ---CGAGCGG ----CGAGCGA
ACGAUGA--- -GACGAAU-- --GACGAUG--
-CGACGAA-- -GACGAAA-- -AGACGAU---
GAUACGA--- -GACGAAG-- AGAACGA----
---ACGAUAA -GACGAUG-- --GACGAAA--

generated on Wed Aug 10 03:58:45 EDT 2022