RNAcompete results for RNCMPT00323 / CBG13971 (Species:Caenorhabditis_briggsae)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

AGCACUU 17.55 GCACUUU 15.72 AGCACUU 17.93
GCACUUU 14.73 AGCACUU 15.01 GCACUUU 16.83
GCACUUA 14.27 UGCACUU 11.78 GCACUUA 14.08
UGCACUU 11.83 GCACUUA 11.31 UGCACUU 12.95
GCACUUG 9.69 GCACUUG 9.46 GCACUUG 10.59
CGCACUU 8.75 CGCACUU 8.36 CGCACUU 9.45
GCACUUC 8.40 UAGCACU 7.42 UUGCACU 7.73
GGCACUU 8.30 AAGCACU 7.20 AUUGCAC 7.66
AUUGCAC 8.23 UUGCACU 6.84 GGCACUU 7.51
UUGCACU 7.13 CACUUUG 6.16 UAGCACU 7.39

Aligned top 7-mers

Set A

Set B

All data

--AGCACUU- --GCACUUU- --AGCACUU-
---GCACUUU -AGCACUU-- ---GCACUUU
---GCACUUA -UGCACUU-- ---GCACUUA
--UGCACUU- --GCACUUA- --UGCACUU-
---GCACUUG --GCACUUG- ---GCACUUG
--CGCACUU- -CGCACUU-- --CGCACUU-
---GCACUUC UAGCACU--- -UUGCACU--
--GGCACUU- AAGCACU--- AUUGCAC---
AUUGCAC--- UUGCACU--- --GGCACUU-
-UUGCACU-- ---CACUUUG -UAGCACU--

generated on Wed Aug 10 03:58:34 EDT 2022