RNAcompete results for RNCMPT00301 / rnp-2 (Species:Caenorhabditis_elegans)

Motif


7-mer scatter plot


Top 7-mers by Z-score

Set A

score

Set B

score

Set A+B

score

AGCACUU 47.41 AGCACUU 44.82 AGCACUU 46.92
GCACUUA 39.47 GCACUUU 41.94 GCACUUU 40.30
GCACUUU 37.93 GCACUUA 31.80 GCACUUA 36.14
UGCACUU 35.83 UGCACUU 29.69 UGCACUU 33.11
GCACUUG 27.82 GCACUUG 27.59 GCACUUG 28.23
CGCACUU 23.93 CGCACUU 20.84 CGCACUU 22.90
GCACUUC 17.67 GGCACUU 17.57 GGCACUU 17.72
GGCACUU 17.23 UAGCACU 16.56 GCACUUC 15.37
AUUGCAC 16.40 AAGCACU 16.17 UAGCACU 15.07
UUGCACU 15.27 CACUUUG 15.42 AUUGCAC 14.52

Aligned top 7-mers

Set A

Set B

All data

--AGCACUU- -AGCACUU-- --AGCACUU-
---GCACUUA --GCACUUU- ---GCACUUU
---GCACUUU --GCACUUA- ---GCACUUA
--UGCACUU- -UGCACUU-- --UGCACUU-
---GCACUUG --GCACUUG- ---GCACUUG
--CGCACUU- -CGCACUU-- --CGCACUU-
---GCACUUC -GGCACUU-- --GGCACUU-
--GGCACUU- UAGCACU--- ---GCACUUC
AUUGCAC--- AAGCACU--- -UAGCACU--
-UUGCACU-- ---CACUUUG AUUGCAC---

generated on Wed Aug 10 03:57:51 EDT 2022