Experiment	Strand	Predicted Specific Consensus	Predicted General Consensus	RankMotif score	Known Consensus	Activity	Matching Score		Strand	Predicted Specific Consensus	Predicted General Consensus	RankMotif score	Known Consensus	Activity	Matching Score		Strand	Predicted Specific Consensus	Predicted General Consensus	RankMotif score	Known Consensus	Activity	Matching Score	
ABF1OE	Sense	gcgatnag	dcgcgaar	2.79					Antisense	ctyacagk	avcgcghs	2.71					Both	wgattacc	kaccccgs	2.49				
ADR1OE	Antisense	gtaMGAcb	avcgcghs	3.76	ggAGA	activator	0.60		Sense	gtaMGAcb	dcgcgaar	3.76	ggAGA	activator	0.60		Both	tcacGRMG	kaccccgs	3.23	GGAGa	activator	0.80	
CRZ1OE	Antisense	BcGaKGMg	avcgcghs	11.30	GgGtGGCtg	activator	0.63		Both	gcGaTKaV	kaccccgs	7.41	gGgTGgCtg	activator	0.50		Sense	BcGaKGMg	dcgcgaar	6.53	GgGtGGCtg	activator	0.63	
CST6OE	Both	rcACGgab	kaccccgs	4.63	tgACGtca	activator	0.38		Antisense	YccBcaCW	avcgcghs	4.42	TgaCgtCA	activator	0.50		Sense	mYRMSGag	dcgcgaar	3.94	TGACGtca	activator	0.63	
CUP2OE	Both	bayccack	kaccccgs	12.63					Antisense	hyccrcgv	avcgcghs	10.42					Sense	hbcgygsr	dcgcgaar	9.85				
ECM22OE	Sense	cgCGHbTt	dcgcgaar	7.61	tCGTaTa	activator	0.57		Antisense	YaKgAcAm	avcgcghs	7.57	TcGtAtA	activator	0.57		Both	WCGcgHyt	kaccccgs	6.48	TCGtaTa	activator	0.57	
GAT3OE	Sense	cacakkyt	dcgcgaar	6.13					Antisense	ggswsrtg	avcgcghs	5.54					Both	ggcyvatg	kaccccgs	4.55				
GAT4OE	Both	cgagrayy	kaccccgs	7.70					Antisense	sscsrhcg	avcgcghs	4.59					Sense	rsvgatct	dcgcgaar	3.92				
GCN4-AOE	Antisense	sgTSkacS	avcgcghs	3.89	aTGactCat	activator	0.38		Both	scDAaTCt	kaccccgs	3.85	atGAcTCat	activator	0.50		Sense	RKRgCTgR	dcgcgaar	3.79	ATGaCTcAt	activator	0.75	
GIS1OE	Both	tgtrgygk	kaccccgs	6.71					Antisense	scctycsk	avcgcghs	4.98					Sense	kcyccscw	dcgcgaar	4.63				
GZF3OE	Sense	sgtGgBMA	dcgcgaar	7.22	GaTAAc	repressor	0.67		Antisense	gmmGHTcA	avcgcghs	4.81	GATaAc	repressor	0.67		Both	BRccWCcg	kaccccgs	4.20	GAtaAC	repressor	0.67	
HAC1OE	Antisense	YsVCmaGg	avcgcghs	11.81	CaGCgtG	activator	0.57		Both	wMcGCGNS	kaccccgs	11.08	CaGCGTG	activator	0.86		Sense	kBcBCGsV	dcgcgaar	7.67	CaGCGtG	activator	0.71	
HAP4OE	Antisense	YYyHcgmg	avcgcghs	13.64	CCaAt	activator	0.60		Both	ncgCgWVa	kaccccgs	12.40	CcAAt	activator	0.60		Sense	cSCgAvan	dcgcgaar	11.45	CCaAt	activator	0.60	
HMS1OE	Antisense	vgyagatg	avcgcghs	3.79					Sense	catctrcb	dcgcgaar	3.79					Both	ktcsggty	kaccccgs	3.41				
HSF1OE	Both	KsgSCgBC	kaccccgs	8.82	nGaaNNtTCn	activator	0.47		Antisense	cRRCGscS	avcgcghs	7.98	ngAANNttCn	activator	0.44		Sense	VKRcGGmK	dcgcgaar	7.61	NGAaNNtTcn	activator	0.53	
HSF1OE	Both	KsgSCGBc	kaccccgs	8.82	NttCNNGaan	activator	0.38		Antisense	CRRcGscs	avcgcghs	7.98	nttcnNGAaN	activator	0.31		Sense	vKrCGGMk	dcgcgaar	7.61	ntTcNNGAan	activator	0.44	
INO2OE	Sense	MsgGTakW	dcgcgaar	9.57	CatGTgaAat	activator	0.50		Both	gGRAABgc	kaccccgs	8.71	catgtGAAAT	activator	0.63		Antisense	cKcGRHVc	avcgcghs	6.35	catGtGAAAt	activator	0.63	
MBP1OE	Antisense	gCGgVYdt	avcgcghs	10.85	aCGcGT	activator	0.67		Sense	tHVCGTsc	dcgcgaar	8.80	aCGCGT	activator	0.83		Both	tMDCGDcc	kaccccgs	6.04	aCGCGT	activator	0.83	
MET31OE	Both	cgcswchn	kaccccgs	7.77					Sense	stsgngkg	dcgcgaar	6.71					Antisense	crcwsytt	avcgcghs	6.51				
MET4OE	Sense	gBGaSgms	dcgcgaar	11.28	aaacTGtG	activator	0.38		Both	DAcgcGam	kaccccgs	9.84	AAactGtg	activator	0.38		Antisense	WkTKcGcg	avcgcghs	9.83	aaAcTGtG	activator	0.50	
MET4OE	Sense	gBgASGmS	dcgcgaar	11.28	TcACGtG	activator	0.71		Both	kTCgCGTh	kaccccgs	9.84	TCaCGTg	activator	0.71		Antisense	wKtkCGcG	avcgcghs	9.83	TcaCGtG	activator	0.57	
MGA1OE	Sense	cgcgtkwd	dcgcgaar	8.30					Antisense	ttgtktay	avcgcghs	7.77					Both	ttwcgcgt	kaccccgs	6.31				
MIG1OE	Antisense	TCatCKSa	avcgcghs	6.15	DCccCGCgh	repressor	0.54		Sense	TCatCKSa	dcgcgaar	6.15	DCccCGCgh	repressor	0.54		Both	YCtCatMG	kaccccgs	4.51	DCcCcgCGh	repressor	0.54	
MOT3OE	Both	sttgccty	kaccccgs	6.16					Antisense	ttgcckky	avcgcghs	5.47					Sense	gttscbtc	dcgcgaar	4.48				
MSN2OE	Sense	YBBCTgtc	dcgcgaar	5.81	CCCCT	activator	1.00		Both	CSCYscav	kaccccgs	5.45	CCCCt	activator	0.80		Antisense	BgCTrgtr	avcgcghs	5.39	cCcCT	activator	0.60	
PHO4OE	Both	bggYcCGm	kaccccgs	3.64	CaCGtg	activator	0.50		Sense	MtGYGwtg	dcgcgaar	3.57	cAcGTG	activator	0.67		Antisense	ggkCNMKc	avcgcghs	3.44	CACGtg	activator	0.67	
PUT3OE	Both	gbcgrgvs	kaccccgs	7.60					Sense	trdcygyg	dcgcgaar	7.13					Antisense	vtgvaygt	avcgcghs	5.55				
RAP1OE	Sense	tytACCSt	dcgcgaar	3.83	rmACCCanncayy	repressor	0.50		Both	RACCSgAA	kaccccgs	3.75	rMACCCaNNcayy	repressor	0.63		Antisense	CMGKwAgS	avcgcghs	3.61	rmaccCANNcAyY	repressor	0.53	
RFX1OE	Sense	gtygcyhs	dcgcgaar	5.68					Antisense	gnrgcamc	avcgcghs	4.71					Both	csggccwv	kaccccgs	3.85				
RGM1OE	Both	sdtcgtta	kaccccgs	3.98					Antisense	cycwggyd	avcgcghs	3.70					Sense	tgmtgrwt	dcgcgaar	3.30				
RME1OE	Antisense	ttaSWAYg	avcgcghs	5.70	GWACctcaara	activator	0.50		Sense	ttaSWAYg	dcgcgaar	5.70	GWACctcaara	activator	0.50		Both	cGAMCSYB	kaccccgs	4.83	GWACCTCaara	activator	0.81	
RME1OE	Antisense	ttaSWAYg	avcgcghs	5.70	GWACctcaara	repressor	0.50		Sense	ttaSWAYg	dcgcgaar	5.70	GWACctcaara	repressor	0.50		Both	cGAMCSYB	kaccccgs	4.83	GWACCTCaara	repressor	0.81	
ROX1OE	Both	CYATTGYB	kaccccgs	12.37	yYYATTGTTctc	repressor	0.94		Antisense	CHDTTGTB	avcgcghs	8.24	yYYATTGTTctc	repressor	0.94		Sense	CHDTTGTB	dcgcgaar	8.24	yYYATTGTTctc	repressor	0.94	
RSC30OE	Antisense	bmscccbt	avcgcghs	8.27					Sense	aggggynn	dcgcgaar	6.81					Both	gsgcscht	kaccccgs	6.60				
SFP1OE	Both	ccmcsycd	kaccccgs	5.91					Sense	chvcccbt	dcgcgaar	5.84					Antisense	rvgggggm	avcgcghs	5.37				
SKN7OE	Both	gwtgYwtC	kaccccgs	6.61	ggcCggC	activator	0.29		Sense	taGVBGcB	dcgcgaar	6.39	gGCCGgC	activator	0.71		Antisense	mwSCGSCk	avcgcghs	4.75	ggCCGGC	activator	0.71	
SOK2OE	Both	gmgcgbyr	kaccccgs	11.88					Sense	mvtsccbv	dcgcgaar	9.01					Antisense	ymmskrgc	avcgcghs	8.73				
STE12OE	Sense	tcGYGgNH	dcgcgaar	6.73	RTGaAAca	activator	0.56		Antisense	cGcGAMRd	avcgcghs	6.46	RtGAAAca	activator	0.56		Both	cGcGAMRw	kaccccgs	4.87	RtGAAAca	activator	0.56	
STP2OE	Antisense	hccwccnc	avcgcghs	7.24					Sense	ttymccyg	dcgcgaar	7.09					Both	cgntgtts	kaccccgs	4.34				
SUT1OE	Both	vnwctccg	kaccccgs	11.46					Antisense	bmtccgns	avcgcghs	8.75					Sense	sncggakv	dcgcgaar	8.75				
SWI4OE	Antisense	HTmCtaGt	avcgcghs	3.58	tTTtCgcG	activator	0.50		Sense	HTmCtaGt	dcgcgaar	3.58	tTTtCgcG	activator	0.50		Both	TgcWCtMG	kaccccgs	3.16	TttTCgCG	activator	0.63	
UPC2OE	Sense	mYCtccTW	dcgcgaar	6.22	TCgtaTA	activator	0.57		Antisense	gCRYyKsg	avcgcghs	5.65	tCGTaTa	activator	0.57		Both	mccTCcKW	kaccccgs	4.85	TCgTAta	activator	0.57	
XBP1OE	Both	CTCGARNV	kaccccgs	17.17	gcCTCGARGMgr	repressor	1.00		Sense	BCTCGAVV	dcgcgaar	14.86	gCCTCGARGmgr	repressor	1.00		Antisense	BTCGARVV	avcgcghs	14.81	gcCTCGARGMgr	repressor	1.00	
YAP1OE	Both	ygcgwcvs	kaccccgs	7.39					Antisense	ckcttkgb	avcgcghs	7.04					Sense	kngcgtdg	dcgcgaar	5.07				
YHP1OE	Antisense	NTYcgcaw	avcgcghs	5.69	yaATTa	repressor	0.50		Both	RcTNcgcv	kaccccgs	5.61	yAaTTa	repressor	0.50		Sense	cVRcgTRk	dcgcgaar	5.13	YAatTA	repressor	0.58	
YOX1OE	Both	WyTcVcga	kaccccgs	8.16	yAaTtA	repressor	0.50		Antisense	YMcYmMgc	avcgcghs	6.58	YAaTtA	repressor	0.67		Sense	wNgcgWAg	dcgcgaar	5.29	YaatTA	repressor	0.50	
YPR015COE	Both	grttsgck	kaccccgs	5.67					Sense	gcsdmtsg	dcgcgaar	5.37					Antisense	rgsrggrg	avcgcghs	4.97				
YRR1OE	Sense	vtcngmgc	dcgcgaar	6.28					Both	gkcdaacb	kaccccgs	5.91					Antisense	ctgbcncv	avcgcghs	5.50				
ZAP1OE	Antisense	tgRCSMgG	avcgcghs	4.15	ACCYyNaaggt	activator	0.47		Both	gACCMaTk	kaccccgs	3.49	ACCYyNaaggt	activator	0.47		Sense	AHAGccgc	dcgcgaar	3.37	accyyNAAGgt	activator	0.41