Yeast structural features

Desiree Tillo
15 March 2007
Updated:  23 September 2007 - Chromosome 10 coordinates are now the same as the genome build used in Nature Genetics paper (February 2006)
email:  desiree -dot- tillo -at- utoronto -dot- ca


Column headers for each of the tab-delimited text files are as follows:

1	Chromosomal coordinate start (starting at 0)
2	Chromosomal coordinate end 
3	Midpoint coordinate
4	GC content	
5	Melting temperature	
6	Free energy of bending 1  (Khrapunov and Sivolob, 1995)	
7	Free energy of bending 2	(Khrapunov and Sivolob, 1995)
8	Enthalpy change	
9	Free energy	
10	Entropy	
11	Clash strength	
12	Twist	
13	Roll	
14	Rise	
15	Major groove size	
16	Minor groove size	
17	Major groove mobility	
18	Minor groove mobility	
19	Propeller	
20	Slide	
21	Tilt	
22	Tip	
23	Wedge	
24	Nucleosome probability 	

Features in columns 8-24 were downloaded from http://srs6.bionet.nsc.ru/srs6bin/cgi-bin/wgetz?-page+FieldInfo+-id+6F1Iv1SJDVl+-lib+PROPERTY+-bf+PropertyName, and the average feature value for a 75 base window is reported for each column.